fasttree.log

The console output of FastTree.

Produced by

• infer

• de_novo_wf

Example

FastTree Version 2.1.10 Double precision (No SSE3)
Alignment: msa.faa
Amino acid distances: BLOSUM45 Joins: balanced Support: SH-like 1000
Search: Normal +NNI +SPR (2 rounds range 10) +ML-NNI opt-each=1
TopHits: 1.00*sqrtN close=default refresh=0.80
ML Model: Whelan-And-Goldman, CAT approximation with 20 rate categories
Initial topology in 0.00 seconds
Refining topology: 0 rounds ME-NNIs, 2 rounds ME-SPRs, 0 rounds ML-NNIs
Total branch-length 0.000 after 0.00 sec
Total time: 0.00 seconds Unique: 1/1 Bad splits: 0/0