mash_distances.msh

The raw output of the distance from each genome to the GTDB-Tk reference genomes as determined by Mash.

Produced by

• ani_rep

• classify

• classify_wf

Example

/srv/db/gtdbtk/official/release89/fastani/database/GCA_000285855.2_genomic.fna.gz   genomes/genome_1.fna    0.295981        0.000426011     1/1000
/srv/db/gtdbtk/official/release89/fastani/database/GCA_000433035.1_genomic.fna.gz   genomes/genome_1.fna    0.295981        0.000242431     1/1000
/srv/db/gtdbtk/official/release89/fastani/database/GCA_000434315.1_genomic.fna.gz   genomes/genome_1.fna    0.295981        0.000303707     1/1000
/srv/db/gtdbtk/official/release89/fastani/database/GCA_000437515.1_genomic.fna.gz   genomes/genome_1.fna    0.295981        0.00024794      1/1000
/srv/db/gtdbtk/official/release89/fastani/database/GCA_000806015.1_genomic.fna.gz   genomes/genome_1.fna    0.295981        0.000125283     1/1000
/srv/db/gtdbtk/official/release89/fastani/database/GCA_000961725.1_genomic.fna.gz   genomes/genome_1.fna    0.295981        0.000460228     1/1000
/srv/db/gtdbtk/official/release89/fastani/database/GCA_000989525.1_genomic.fna.gz   genomes/genome_1.fna    0.295981        0.000167986     1/1000
/srv/db/gtdbtk/official/release89/fastani/database/GCA_000993685.1_genomic.fna.gz   genomes/genome_1.fna    0.295981        0.000175098     1/1000
/srv/db/gtdbtk/official/release89/fastani/database/GCA_000996035.1_genomic.fna.gz   genomes/genome_1.fna    0.263022        8.80681e-09     2/1000
/srv/db/gtdbtk/official/release89/fastani/database/GCA_001003475.1_genomic.fna.gz   genomes/genome_1.fna    0.295981        0.000127206     1/1000