pplacer.<domain>.out

The raw output generated by pplacer.

Produced by

• classify

• classify_wf

Example

Running pplacer v1.1.alpha19-0-g807f6f3 analysis on align_output/align/gtdbtk.ar53.user_msa.fasta...
Didn't find any reference sequences in given alignment file. Using supplied reference alignment.
Pre-masking sequences... sequence length cut from 5124 to 5114.
Determining figs... figs disabled.
Allocating memory for internal nodes... done.
Caching likelihood information on reference tree... done.
Pulling exponents... done.
Preparing the edges for baseball... done.
working on genome_1 (1/3)...
working on genome_2 (2/3)...
working on genome_3 (3/3)...