protein.faa

The raw output generated by Prodigal.

Produced by

• identify

• classify_wf

Example

>NC_013790.1_11 # 13256 # 14119 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.376
MKIKIAVPSKGRISEPSIKILEKAGLGLKDSTNRKLFSSTYNENIDVMFARAADIPEFVD
EGICDMGISGYDLIEEAGADVKILTDLQFGATKLVLASPENSEINTKDDLKDGMTIATEF
PNLTRKYLEENNLNIKIVKLTGSTEIAPFIGIADAITDLTSTGTTLNMNHLKIVDVILES
SIKLIANKNSYTEKNNLVEAVSTSIQGVLEAERKKLVMMNVAKENLCEVQKVMPAMSGPT
ISQVLSEEETMAVQAVVGEDEVFDLVNKLRNAGARDILVVPIERIIQ*
>NC_013790.1_12 # 14771 # 14974 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.373
MSIPVAPIGRIIKDAGAERVSEDAKKELNAYVTAQAEAVAKKAIEFAAMAKRKTVKAEDI
ELAIKNL*
>NC_013790.1_13 # 15320 # 16339 # 1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.354
MGRRKKQDSTLDSYFPDSDLIEEKKKKDEACKICGNPIEDATFQRCRKCLNKLALIDDLR
ELLEYVSPGESFREIDLINKGFKSLKLNILISKFLKEQLILINLDGLFTLNNIDFLNAFI
KKYGEKEKPLKETDYLIVRDDKSAFYIDVNNYSDYIKIRFNPRINKWQVDFFNENGLANT
KSFIDSNDANKEAIYYIKQLGVIGSSADDKKEEKSDKRLYSSHEGIYYSPSRGMWGAKVK
GYKGFKFIGHFSSEEEAYEARCKYLENKERTRQKYISEKRGLKSGLRNQSSGELIYFSKQ
KGKWIVRLKNKEGQIVNVGQFDTEEEANKAKEEFIKDNS*
>NC_013790.1_14 # 16923 # 17243 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.355
MSELKLDLVFDDYQIKRAKPARGSSVIHVNKRWIGKEVSIIPLPFDVDEKFIDETKGEDG
LYHLELAVKEIFSKTVSDRKDVGFFYLKESLLGLFFLIIEAPDIVY*